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Intron Name: Anas_platyrhynchos_platyrhynchos_18_11180857_11181905_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

11180857 - 11181905

Intron Length:

1049

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

GCCTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

AGCCCTTTAATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

75.5

34.3

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

0.74

0.8

80.2

31.8

Minor 5ss

38.2

-1.3

2.8

51.4

39.2

Minor BPS

58.9

0.14

1.4

55.72

Associated Gene:

Gene:

MVB12B

Ensembl Gene ID:

ENSAPLG00000002612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028792

11180770 - 11229933

49164