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Intron Name: Anas_platyrhynchos_platyrhynchos_18_11188111_11191307_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11188111 - 11191307

Intron Length:

3197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTCCG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTTCAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TAATCGTTGACT

Flanking Amino Acid:

CFTRSFSKENSHLGNVLVDM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

68.3

42.6

Major BPS

0.92

0.9

86.2

29.1

Major PPT

72.7

0.51

73.9

28.6

Minor 5ss

-1.5

2.9

47.4

Minor BPS

63.1

0.49

2.1

81.02

40.6

Associated Gene:

Gene:

MVB12B

Ensembl Gene ID:

ENSAPLG00000002612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028792

11180770 - 11229933

49164

ENSAPLT00000017246

11148150 - 11242304

94155

ENSAPLT00000034598

11181684 - 11229933

48250

ENSAPLT00000002643

11181403 - 11238647

57245

ENSAPLT00000030934

11167010 - 11238859

71850

ENSAPLT00000029122

11167010 - 11214925

47916