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Intron Name: Anas_platyrhynchos_platyrhynchos_18_11191405_11194307_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11191405 - 11194307

Intron Length:

2903

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTTGG

5'SS Class:

major

3'SS Sequence:

TTTGTTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAAAAA

U12 Branch Point Sequence:

TTTGTTTTTACA

Flanking Amino Acid:

FIPIQETVDTQEVAFRKKRL

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.3

69.7

43.7

Major BPS

47.9

-0.1

0.9

51.7

28.4

Major PPT

92.3

0.95

0.7

87.5

Minor 5ss

-1

2.8

48.5

41.1

Minor BPS

60.3

0.32

1.7

74.12

37.8

Associated Gene:

Gene:

MVB12B

Ensembl Gene ID:

ENSAPLG00000002612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002643

11181403 - 11238647

57245

ENSAPLT00000030934

11167010 - 11238859

71850

ENSAPLT00000029122

11167010 - 11214925

47916

ENSAPLT00000028792

11180770 - 11229933

49164

ENSAPLT00000017246

11148150 - 11242304

94155

ENSAPLT00000034598

11181684 - 11229933

48250