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Intron Name: Anas_platyrhynchos_platyrhynchos_18_11194843_11207717_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11194843 - 11207717

Intron Length:

12875

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTCTGCCTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAT

U12 Branch Point Sequence:

TCTGCCTTGAAG

Flanking Amino Acid:

PSSTPAPNLPRNHSQVLPGA

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.9

1.06

0.6

14.8

Major BPS

71.2

0.53

37.5

Major PPT

67.9

0.4

67.4

32.9

Minor 5ss

40.7

-1

57.8

46.8

Minor BPS

59.6

0.16

1.7

63.47

44.6

Associated Gene:

Gene:

MVB12B

Ensembl Gene ID:

ENSAPLG00000002612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028792

11180770 - 11229933

49164

ENSAPLT00000002643

11181403 - 11238647

57245

ENSAPLT00000034598

11181684 - 11229933

48250