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Intron Name: Anas_platyrhynchos_platyrhynchos_18_11229763_11231865_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11229763 - 11231865

Intron Length:

2103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TTTATTCCACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTC

Flanking Amino Acid:

SEKFACAPEGMQPVDLLGIT

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

74.5

32.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.9

0.63

0.9

71.5

39.3

Minor 5ss

34.6

-1.8

2.8

35.2

41.4

Minor BPS

67.3

0.52

1.5

77.16

33.3

Associated Gene:

Gene:

MVB12B

Ensembl Gene ID:

ENSAPLG00000002612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017246

11148150 - 11242304

94155

ENSAPLT00000002643

11181403 - 11238647

57245

ENSAPLT00000030934

11167010 - 11238859

71850