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Intron Name: Anas_platyrhynchos_platyrhynchos_18_11408086_11409080_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

11408086 - 11409080

Intron Length:

995

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATCAT

U12 Branch Point Sequence:

ATATCATTAAAC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

79.4

0.73

80.1

Major PPT

86.6

0.82

0.6

85.9

21.2

Minor 5ss

31.6

-2.1

3.3

41.1

45.4

Minor BPS

63.9

0.41

1.7

72.93

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011551

11403922 - 11412716

8795