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Intron Name: Anas_platyrhynchos_platyrhynchos_18_11409159_11409561_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

11409159 - 11409561

Intron Length:

403

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTGT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTTATTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TCCTCTTTTATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.8

38.3

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

0.79

0.8

84.4

29.4

Minor 5ss

40.5

-1.1

3.2

58.3

46.4

Minor BPS

62.6

0.48

1.6

75.01

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011551

11403922 - 11412716

8795