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Intron Name: Anas_platyrhynchos_platyrhynchos_18_11409629_11410605_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

11409629 - 11410605

Intron Length:

977

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGGAT

5'SS Class:

strong_major

3'SS Sequence:

GTGTCTTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAG

U12 Branch Point Sequence:

TAAGCAGTGACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

38.2

Major BPS

55.4

0.13

1.6

63.6

42.5

Major PPT

79.4

0.66

0.9

73.5

Minor 5ss

29.5

-2.3

3.8

45.4

49.7

Minor BPS

45.1

-0.3

2.3

65.94

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011551

11403922 - 11412716

8795