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Intron Name: Anas_platyrhynchos_platyrhynchos_18_11454880_11469386_R

Intron Information:

Intron Rank:

146367

Intron Class:

major

Intron Phase:

Intron Coordinates:

11454880 - 11469386

Intron Length:

14507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTTTTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.8

81.1

26.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

29.7

-2.3

2.6

30.1

36.9

Minor BPS

43.9

-0.3

3.5

78.47

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026096

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032092

11454266 - 11490014

35749