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Intron Name: Anas_platyrhynchos_platyrhynchos_18_11488310_11489676_R

Intron Information:

Intron Rank:

146354

Intron Class:

major

Intron Phase:

Intron Coordinates:

11488310 - 11489676

Intron Length:

1367

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TCTCTTTTTAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

84.6

33.3

Major BPS

72.7

0.56

30.1

Major PPT

81.2

0.7

0.9

86.4

Minor 5ss

-1.4

3.4

57.1

47.2

Minor BPS

46.9

-0.3

1.8

53.05

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026096

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032590

11454266 - 11490014

35749

ENSAPLT00000026291

11454266 - 11490014

35749

ENSAPLT00000024271

11477625 - 11490014

12390