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Intron Name: Anas_platyrhynchos_platyrhynchos_18_11597947_11601967_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

11597947 - 11601967

Intron Length:

4021

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTACA

5'SS Class:

strong_major

3'SS Sequence:

GTTTGCTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTTAGA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

75.1

34.3

Major BPS

100

1.24

0.5

100

Major PPT

83.3

0.75

0.9

76.3

37.8

Minor 5ss

42.2

-0.9

2.4

48.9

42.2

Minor BPS

55.7

0.17

2.2

76.76

39.9

Associated Gene:

Gene:

RALGPS1

Ensembl Gene ID:

ENSAPLG00000011266

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019565

11590928 - 11691354

100427

ENSAPLT00000011790

11590928 - 11691354

100427