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Intron Name: Anas_platyrhynchos_platyrhynchos_18_11602095_11603802_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11602095 - 11603802

Intron Length:

1708

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAATTC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTGTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

AGATGTGTACTT

Flanking Amino Acid:

NVMVTSATPEGSSSSDSLEG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

78.4

30.1

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

81.5

0.71

0.9

77.2

37.1

Minor 5ss

41.9

-0.9

3.2

45.7

Minor BPS

39.3

-0.7

2.3

55.06

41.6

Associated Gene:

Gene:

RALGPS1

Ensembl Gene ID:

ENSAPLG00000011266

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011790

11590928 - 11691354

100427

ENSAPLT00000019565

11590928 - 11691354

100427