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Intron Name: Anas_platyrhynchos_platyrhynchos_18_11604729_11605249_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11604729 - 11605249

Intron Length:

521

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CATTACTGACTT

Flanking Amino Acid:

MPVFKAIQPEELASCGWNKK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

87.9

29.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

76.5

0.6

0.9

69.9

40.9

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

48.1

-0

1.9

66.96

43.7

Associated Gene:

Gene:

RALGPS1

Ensembl Gene ID:

ENSAPLG00000011266

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019565

11590928 - 11691354

100427

ENSAPLT00000011790

11590928 - 11691354

100427