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Intron Name: Anas_platyrhynchos_platyrhynchos_18_11605876_11607000_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11605876 - 11607000

Intron Length:

1125

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

ACTAAGCCAACC

Flanking Amino Acid:

ILSHFVKIAKKLLDLNNLHS

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

77.9

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

34.7

-1.7

3.2

41.8

38.8

Minor BPS

36.4

-1

2.3

47.79

41.1

Associated Gene:

Gene:

RALGPS1

Ensembl Gene ID:

ENSAPLG00000011266

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019565

11590928 - 11691354

100427

ENSAPLT00000011790

11590928 - 11691354

100427