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Intron Name: Anas_platyrhynchos_platyrhynchos_18_11609085_11660291_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11609085 - 11660291

Intron Length:

51207

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTATTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

AATTGATCAATT

Flanking Amino Acid:

LKMVPTIPYLGIYLLDLIYI

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

77.5

32.8

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

86.3

0.82

0.9

84.8

35.6

Minor 5ss

26.6

-2.7

31.8

42.6

Minor BPS

47.4

-0.1

2.1

69.35

41.4

Associated Gene:

Gene:

RALGPS1

Ensembl Gene ID:

ENSAPLG00000011266

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011790

11590928 - 11691354

100427

ENSAPLT00000019565

11590928 - 11691354

100427