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Intron Name: Anas_platyrhynchos_platyrhynchos_18_11681454_11682318_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11681454 - 11682318

Intron Length:

865

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGGGTGTA

5'SS Class:

major

3'SS Sequence:

TATATTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTATAT

U12 Branch Point Sequence:

CTCTCTATATTT

Flanking Amino Acid:

RHRKSHSLGNNMMCQFSIVE

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

71.3

34.5

Major BPS

66.7

0.41

1.1

63.2

42.8

Major PPT

85.3

0.8

77.3

41.4

Minor 5ss

31.1

-2.2

3.5

39.2

Minor BPS

1.9

67.91

43.9

Associated Gene:

Gene:

RALGPS1

Ensembl Gene ID:

ENSAPLG00000011266

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019565

11590928 - 11691354

100427

ENSAPLT00000011790

11590928 - 11691354

100427