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Intron Name: Anas_platyrhynchos_platyrhynchos_18_11682471_11683727_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11682471 - 11683727

Intron Length:

1257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGAGTCT

5'SS Class:

major

3'SS Sequence:

CCTCTTTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

GTTTTCTTACTC

Flanking Amino Acid:

NSVFTNGISIDSSESSEFSE

Intron Amino Acid Position:

397

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

66.4

39.9

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

82.9

0.74

0.7

76.2

32.4

Minor 5ss

37.3

-1.4

3.6

56.2

48.2

Minor BPS

66.4

0.49

1.6

74.33

36.8

Associated Gene:

Gene:

RALGPS1

Ensembl Gene ID:

ENSAPLG00000011266

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019565

11590928 - 11691354

100427

ENSAPLT00000011790

11590928 - 11691354

100427