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Intron Name: Anas_platyrhynchos_platyrhynchos_18_11684146_11687943_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11684146 - 11687943

Intron Length:

3798

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGTTC

5'SS Class:

major

3'SS Sequence:

TACGTCTCTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTAAT

U12 Branch Point Sequence:

TTTAGCTCAAAA

Flanking Amino Acid:

NSPRSRSCVYSPTGAGSYTL

Intron Amino Acid Position:

441

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

67.4

38.9

Major BPS

69.2

0.48

1.3

69.7

44.2

Major PPT

71.3

0.48

0.9

62.6

39.4

Minor 5ss

39.6

-1.2

3.6

58.4

46.5

Minor BPS

-0

2.1

70.07

41.7

Associated Gene:

Gene:

RALGPS1

Ensembl Gene ID:

ENSAPLG00000011266

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019565

11590928 - 11691354

100427

ENSAPLT00000011790

11590928 - 11691354

100427