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Intron Name: Anas_platyrhynchos_platyrhynchos_18_11689269_11689442_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11689269 - 11689442

Intron Length:

174

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTCTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTTAT

U12 Branch Point Sequence:

TCTGACTTATTT

Flanking Amino Acid:

KSLRGTERKHYKSTPGKKVS

Intron Amino Acid Position:

508

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

80.8

34.4

Major BPS

65.9

0.39

1.2

57.6

41.3

Major PPT

81.6

0.71

0.8

73.1

37.3

Minor 5ss

57.8

0.26

2.7

78.1

36.5

Minor BPS

52.8

0.17

1.9

72.33

Associated Gene:

Gene:

RALGPS1

Ensembl Gene ID:

ENSAPLG00000011266

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019565

11590928 - 11691354

100427

ENSAPLT00000011790

11590928 - 11691354

100427