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Intron Name: Anas_platyrhynchos_platyrhynchos_18_11689549_11690643_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11689549 - 11690643

Intron Length:

1095

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGATATT

5'SS Class:

strong_major

3'SS Sequence:

CTTATTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

ATTCTCTTATTT

Flanking Amino Acid:

DIFQLNNPDKGNVYKFQTGS

Intron Amino Acid Position:

543

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

84.2

33.9

Major BPS

79.1

0.72

69.3

38.4

Major PPT

84.5

0.78

0.7

Minor 5ss

39.6

-1.2

3.3

59.2

45.4

Minor BPS

63.7

0.51

1.5

79.4

36.8

Associated Gene:

Gene:

RALGPS1

Ensembl Gene ID:

ENSAPLG00000011266

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019565

11590928 - 11691354

100427

ENSAPLT00000011790

11590928 - 11691354

100427