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Intron Name: Anas_platyrhynchos_platyrhynchos_18_11690736_11691324_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11690736 - 11691324

Intron Length:

589

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

CGTTTTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAC

U12 Branch Point Sequence:

TGTTGAATAATT

Flanking Amino Acid:

DDACKSNKPQVPANLMSFE*

Intron Amino Acid Position:

574

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

0.5

0.9

61.4

35.9

Major PPT

85.2

0.79

0.8

76.9

37.3

Minor 5ss

34.4

-1.8

3.4

46.7

48.6

Minor BPS

48.4

-0

2.2

75.08

41.5

Associated Gene:

Gene:

RALGPS1

Ensembl Gene ID:

ENSAPLG00000011266

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019565

11590928 - 11691354

100427

ENSAPLT00000011790

11590928 - 11691354

100427