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Intron Name: Anas_platyrhynchos_platyrhynchos_18_11731109_11731536_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
11731109 - 11731536

Intron Length:
428

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATGTACC

5'SS Class:
strong_major

3'SS Sequence:
TTTTTAATTCTAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TGCTTTTTAATT

Flanking Amino Acid:
LLSADKYEIKIWPIGREINC

Intron Amino Acid Position:
303

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.5
0.91
0.8
80.6
31.9

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
82.7
0.74
0.8
75.5
38.4

Minor 5ss
43.1
-0.8
2.4
55.1
42.2

Minor BPS
72.1
0.77
1.1
79.54
37.3

Associated Gene:

Gene:
FBXW2

Ensembl Gene ID:

Chromosome:
18

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

11726576 - 11735596
9021

11726576 - 11735596
9021