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Intron Name: Anas_platyrhynchos_platyrhynchos_18_11741209_11741665_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
11741209 - 11741665

Intron Length:
457

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGATGAGA

5'SS Class:
major

3'SS Sequence:
ATCTTTTTAACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTCAT

U12 Branch Point Sequence:
ATCTTTTTAACA

Flanking Amino Acid:
RQIKANVEEEGLNLYEFKNP

Intron Amino Acid Position:
247

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.4
0.6
1
67.6
39

Major BPS
100
1.24
0.5
100
0

Major PPT
80.6
0.69
0.9
77.1
35.2

Minor 5ss
26.3
-2.7
2.9
31.4
42.3

Minor BPS
75
0.78
1.1
76.76
34.5

Associated Gene:

Gene:
SLC2A8

Ensembl Gene ID:

Chromosome:
18

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

11737483 - 11745081
7599