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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1259709_1260383_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1259709 - 1260383

Intron Length:

675

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAGGTGCC

5'SS Class:

major

3'SS Sequence:

CCTTCTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACACAC

U12 Branch Point Sequence:

TTTGCCAACACA

Flanking Amino Acid:

GKLDKVLKSLKPAPEEALKW

Intron Amino Acid Position:

661

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

71.1

34.2

Major BPS

51.2

0.03

0.9

58.7

27.5

Major PPT

82.6

0.73

0.7

76.9

25.1

Minor 5ss

34.3

-1.8

3.4

44.2

37.7

Minor BPS

45.9

-0.3

2.4

67.8

44.7

Associated Gene:

Gene:

RGS3

Ensembl Gene ID:

ENSAPLG00000004884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029677

1258623 - 1313027

54405

ENSAPLT00000005115

1258623 - 1316460

57838