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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1260486_1263698_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1260486 - 1263698

Intron Length:

3213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTGTC

5'SS Class:

major

3'SS Sequence:

TCTTCTTCTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAC

U12 Branch Point Sequence:

CGCCTCCTAACG

Flanking Amino Acid:

ETSRKKRSRSLAKDMKNRLG

Intron Amino Acid Position:

627

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.1

36.6

Major BPS

0.55

71.8

31.4

Major PPT

0.77

0.7

77.4

31.3

Minor 5ss

40.2

-1.1

3.4

62.5

42.2

Minor BPS

47.7

-0.3

1.8

49.74

Associated Gene:

Gene:

RGS3

Ensembl Gene ID:

ENSAPLG00000004884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029677

1258623 - 1313027

54405

ENSAPLT00000005115

1258623 - 1316460

57838