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Intron Name: Anas_platyrhynchos_platyrhynchos_18_127393_127712_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

127393 - 127712

Intron Length:

320

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

CCTCCCCGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTGCAT

U12 Branch Point Sequence:

CTGTGCATAACA

Flanking Amino Acid:

DVGLALGTLYGKMFSQTTIC

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.81

0.9

80.5

34.9

Major BPS

59.8

0.25

1.5

71.4

45.1

Major PPT

71.2

0.48

0.9

64.9

30.6

Minor 5ss

49.9

-0

2.8

70.4

41.2

Minor BPS

0.09

2.1

67.91

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002512

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002526

125920 - 130663

4744

ENSAPLT00000002355

125920 - 139739

13820