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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1280580_1292373_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1280580 - 1292373

Intron Length:

11794

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTACGTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAC

U12 Branch Point Sequence:

TTTCCTTTACGT

Flanking Amino Acid:

RKFCILYLAEKSECLLSLEA

Intron Amino Acid Position:

351

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

90.4

20.6

Major BPS

0.42

1.1

57.7

Major PPT

73.6

0.53

73.7

35.6

Minor 5ss

33.2

-1.9

3.4

48.7

47.5

Minor BPS

0.36

1.9

80.9

41.2

Associated Gene:

Gene:

RGS3

Ensembl Gene ID:

ENSAPLG00000004884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029677

1258623 - 1313027

54405

ENSAPLT00000005115

1258623 - 1316460

57838