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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1298335_1305979_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1298335 - 1305979

Intron Length:

7645

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACAC

5'SS Class:

strong_major

3'SS Sequence:

TTGTGCCATCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

AGTTCCTGATGC

Flanking Amino Acid:

LHESRSRTIQVTLFVYSDLL

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

75.1

35.1

Major BPS

78.8

0.71

67.6

40.6

Major PPT

72.2

0.5

63.1

43.3

Minor 5ss

32.3

-2

3.1

41.7

Minor BPS

48.7

-0.1

62.68

42.4

Associated Gene:

Gene:

RGS3

Ensembl Gene ID:

ENSAPLG00000004884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029677

1258623 - 1313027

54405

ENSAPLT00000005115

1258623 - 1316460

57838