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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1307764_1311926_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1307764 - 1311926

Intron Length:

4163

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTGGTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

TTTTCTGTACGC

Flanking Amino Acid:

PVYQENNATVGNGCKGKSHT

Intron Amino Acid Position:

208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

73.2

39.3

Major BPS

78.8

0.71

67.6

40.6

Major PPT

75.8

0.58

68.5

42.1

Minor 5ss

40.1

-1.1

2.8

44.4

43.5

Minor BPS

47.3

-0.2

2.4

69.26

Associated Gene:

Gene:

RGS3

Ensembl Gene ID:

ENSAPLG00000004884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005115

1258623 - 1316460

57838

ENSAPLT00000029677

1258623 - 1313027

54405