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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1341483_1341891_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1341483 - 1341891

Intron Length:

409

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGGGTGCC

5'SS Class:

major

3'SS Sequence:

ATTTGTTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATAAA

U12 Branch Point Sequence:

AAAACTCGAATT

Flanking Amino Acid:

AVITRIIKEALPDGVNISKE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

62.1

38.4

Major BPS

63.5

0.33

1.2

64.3

39.6

Major PPT

81.6

0.71

0.8

Minor 5ss

27.6

-2.6

3.3

35.7

41.2

Minor BPS

45.5

-0.2

1.7

59.35

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027330

1341417 - 1344994

3578