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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1358040_1362253_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1358040 - 1362253

Intron Length:

4214

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

GCTTCTCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

TCTGTGCTCACT

Flanking Amino Acid:

WASAVLSCITGSQEILIDEK

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

1.2

80.7

33.6

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

77.6

0.62

0.8

Minor 5ss

32.7

-2

3.2

43.9

43.8

Minor BPS

40.2

-0.6

2.6

63.18

47.3

Associated Gene:

Gene:

BSPRY

Ensembl Gene ID:

ENSAPLG00000007081

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007345

1357513 - 1366837

9325

ENSAPLT00000030242

1357482 - 1366837

9356