Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_1366476_1366786_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1366476 - 1366786

Intron Length:

311

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGCGCC

5'SS Class:

major

3'SS Sequence:

CTCTGTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAG

U12 Branch Point Sequence:

TGGCCCCCAGCT

Flanking Amino Acid:

APAGRAAELRNKLVDQCERL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

66.1

41.2

Major BPS

48.8

-0

1.5

57.1

41.8

Major PPT

0.65

0.9

75.9

Minor 5ss

37.2

-1.5

3.3

43.1

44.2

Minor BPS

44.5

-0.3

2.1

63.95

45.4

Associated Gene:

Gene:

BSPRY

Ensembl Gene ID:

ENSAPLG00000007081

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030242

1357482 - 1366837

9356

ENSAPLT00000007345

1357513 - 1366837

9325