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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1381380_1382550_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1381380 - 1382550

Intron Length:

1171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGAATG

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAT

U12 Branch Point Sequence:

CGTCTGATGACT

Flanking Amino Acid:

DGSVKLWSLESDEPVADIEG

Intron Amino Acid Position:

326

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

1.1

76.6

38.6

Major BPS

73.6

0.59

1.2

65.3

43.7

Major PPT

90.9

0.92

0.6

84.1

30.9

Minor 5ss

33.4

-1.9

2.9

40.7

45.1

Minor BPS

-0.4

2.2

61.81

42.1

Associated Gene:

Gene:

PRPF4

Ensembl Gene ID:

ENSAPLG00000006534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006807

1379392 - 1386880

7489