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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1382675_1383236_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1382675 - 1383236

Intron Length:

562

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGAGCGA

5'SS Class:

major

3'SS Sequence:

CCTTTCTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

AGTTTATGAATT

Flanking Amino Acid:

PDCNLVHTLRGHNTNVGAIV

Intron Amino Acid Position:

285

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.9

0.42

1.1

53.9

44.9

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

78.1

0.63

82.5

26.6

Minor 5ss

28.1

-2.5

3.5

38.4

46.6

Minor BPS

54.7

0.23

1.7

73.22

37.3

Associated Gene:

Gene:

PRPF4

Ensembl Gene ID:

ENSAPLG00000006534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006807

1379392 - 1386880

7489