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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1383296_1383596_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1383296 - 1383596

Intron Length:

301

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTCTAT

U12 Branch Point Sequence:

TTGTGTTCAACA

Flanking Amino Acid:

PNSKFLATACWSGLCKLWSV

Intron Amino Acid Position:

265

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

83.3

29.1

Major BPS

61.5

0.29

1.3

62.1

44.1

Major PPT

74.4

0.55

40.3

Minor 5ss

-0.6

3.2

62.3

43.4

Minor BPS

0.19

71.13

41.5

Associated Gene:

Gene:

PRPF4

Ensembl Gene ID:

ENSAPLG00000006534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006807

1379392 - 1386880

7489