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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1385036_1385538_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1385036 - 1385538

Intron Length:

503

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCTTAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGGTAG

U12 Branch Point Sequence:

CTTGTCTTAACA

Flanking Amino Acid:

DDRSKKSKEEYQQTWYHEGP

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

81.4

Major BPS

39.6

-0.6

1.7

34.9

43.5

Major PPT

77.7

0.62

0.9

73.2

Minor 5ss

42.7

-0.8

3.4

64.6

46.7

Minor BPS

0.75

1.4

78.35

38.8

Associated Gene:

Gene:

PRPF4

Ensembl Gene ID:

ENSAPLG00000006534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006807

1379392 - 1386880

7489