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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1386440_1386808_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1386440 - 1386808

Intron Length:

369

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGGGCC

5'SS Class:

major

3'SS Sequence:

CCTTCCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTAAA

U12 Branch Point Sequence:

AAACCCTAAAAC

Flanking Amino Acid:

PPARPPAPPEATKSKPPEES

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

65.5

34.2

Major BPS

60.4

0.26

1.1

61.5

32.5

Major PPT

82.9

0.74

0.7

76.7

25.3

Minor 5ss

23.6

-3

3.5

32.2

42.8

Minor BPS

49.6

-0

1.8

58.3

39.5

Associated Gene:

Gene:

PRPF4

Ensembl Gene ID:

ENSAPLG00000006534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006807

1379392 - 1386880

7489