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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1393193_1393581_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1393193 - 1393581

Intron Length:

389

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTTTGTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAACAT

U12 Branch Point Sequence:

TGTTCCACAGAT

Flanking Amino Acid:

FSGLTINTPGEMAGAFVAVF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

88.2

26.7

Major BPS

62.2

0.3

1.1

69.4

35.8

Major PPT

79.1

0.65

0.9

79.6

32.4

Minor 5ss

33.8

-1.9

2.6

42.8

44.1

Minor BPS

46.9

-0.1

2.1

72.15

43.7

Associated Gene:

Gene:

SLC31A1

Ensembl Gene ID:

ENSAPLG00000006295

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006534

1392157 - 1395961

3805