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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1393655_1395820_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1393655 - 1395820

Intron Length:

2166

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

ATGTCTTGGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TGTTCTTTATGT

Flanking Amino Acid:

HDHGSGMMMMAMTFHFSYQN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

77.9

36.8

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

64.7

0.33

1.1

61.2

44.1

Minor 5ss

36.2

-1.6

2.7

42.7

38.4

Minor BPS

61.1

0.43

1.9

80.3

41.9

Associated Gene:

Gene:

SLC31A1

Ensembl Gene ID:

ENSAPLG00000006295

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006534

1392157 - 1395961

3805