Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_1415410_1415855_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1415410 - 1415855

Intron Length:

446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGGGTGGC

5'SS Class:

major

3'SS Sequence:

TTTTTGCTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTCAT

U12 Branch Point Sequence:

ATTTAGTTCATT

Flanking Amino Acid:

DDADFLAPGGGARLASLFGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

58.7

40.2

Major BPS

0.65

1.1

77.4

37.3

Major PPT

0.79

0.8

77.9

36.6

Minor 5ss

25.8

-2.8

3.2

25.2

37.3

Minor BPS

47.1

-0.1

2.5

75.01

42.1

Associated Gene:

Gene:

FKBP15

Ensembl Gene ID:

ENSAPLG00000005688

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026142

1415357 - 1440055

24699

ENSAPLT00000005935

1415357 - 1440055

24699