Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_1415966_1416269_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1415966 - 1416269

Intron Length:

304

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TCTTGCTCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACAAAA

U12 Branch Point Sequence:

GTCACCACAAAA

Flanking Amino Acid:

KQPKKGQTAAAGQAAQKAPV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

70.2

35.9

Major BPS

49.2

-0

0.9

54.9

Major PPT

0.77

0.8

81.1

30.9

Minor 5ss

26.7

-2.7

27.9

37.8

Minor BPS

45.1

-0.3

1.9

56.07

Associated Gene:

Gene:

FKBP15

Ensembl Gene ID:

ENSAPLG00000005688

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026142

1415357 - 1440055

24699

ENSAPLT00000005935

1415357 - 1440055

24699