Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_1422851_1423292_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1422851 - 1423292

Intron Length:

442

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TGTGCTTCTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TCTTATTTATGT

Flanking Amino Acid:

TLVFEVEVRRVKLVKEGSGS

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

75.7

34.4

Major BPS

88.7

0.96

0.8

36.5

Major PPT

69.1

0.43

1.1

72.1

38.2

Minor 5ss

31.4

-2.1

3.2

35.2

41.4

Minor BPS

49.5

0.04

72.15

45.1

Associated Gene:

Gene:

FKBP15

Ensembl Gene ID:

ENSAPLG00000005688

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026142

1415357 - 1440055

24699

ENSAPLT00000005935

1415357 - 1440055

24699