Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_1426308_1427753_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1426308 - 1427753

Intron Length:

1446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCAAAA

5'SS Class:

major

3'SS Sequence:

TTTGTTCTGCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

ATATTCTTATCT

Flanking Amino Acid:

VLPGGAQGFQPYPGMPLAYP

Intron Amino Acid Position:

461

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.2

38.9

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

67.6

0.4

1.2

68.2

42.6

Minor 5ss

37.3

-1.4

3.1

48.9

46.9

Minor BPS

69.5

0.69

1.5

82.99

37.9

Associated Gene:

Gene:

FKBP15

Ensembl Gene ID:

ENSAPLG00000005688

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026142

1415357 - 1440055

24699

ENSAPLT00000005935

1415357 - 1440055

24699