Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_1437367_1437921_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1437367 - 1437921

Intron Length:

555

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTGAA

U12 Branch Point Sequence:

TGAATTGTATCT

Flanking Amino Acid:

RSSPADFTEEVKKIMNGVFQ

Intron Amino Acid Position:

906

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

77.7

33.3

Major BPS

64.3

0.35

1.2

55.4

Major PPT

90.9

0.92

0.6

84.1

30.9

Minor 5ss

40.1

-1.1

2.9

49.5

41.1

Minor BPS

43.5

-0.4

2.1

61.52

42.5

Associated Gene:

Gene:

FKBP15

Ensembl Gene ID:

ENSAPLG00000005688

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026142

1415357 - 1440055

24699

ENSAPLT00000005935

1415357 - 1440055

24699