Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_1439553_1439980_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1439553 - 1439980

Intron Length:

428

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGACTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

CCTGTTTTGACT

Flanking Amino Acid:

PSEEEDEEEVSMKGRPPPAP

Intron Amino Acid Position:

1225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

85.3

31.1

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

83.5

0.75

0.9

74.4

40.4

Minor 5ss

47.9

-0.2

2.5

65.4

40.1

Minor BPS

58.2

0.34

1.4

69.3

42.8

Associated Gene:

Gene:

FKBP15

Ensembl Gene ID:

ENSAPLG00000005688

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026142

1415357 - 1440055

24699

ENSAPLT00000005935

1415357 - 1440055

24699