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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1448176_1448741_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1448176 - 1448741

Intron Length:

566

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGCCTTT

5'SS Class:

weak_major

3'SS Sequence:

TTGTGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAGTGAA

U12 Branch Point Sequence:

AAGTCTGGGAGT

Flanking Amino Acid:

NQKPLSLKLQEEGLEKQLVN

Intron Amino Acid Position:

567

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.6

0.16

1.4

61.8

45.3

Major BPS

48.6

-0

1.3

41.1

41.4

Major PPT

85.6

0.8

80.6

Minor 5ss

51.1

0.04

2.9

73.9

42.6

Minor BPS

39.8

-0.7

2.2

54.11

41.9

Associated Gene:

Gene:

LRSAM1

Ensembl Gene ID:

ENSAPLG00000005497

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046007

1446718 - 1469843

23126

ENSAPLT00000045132

1446718 - 1469843

23126

ENSAPLT00000005710

1447029 - 1470969

23941