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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1448841_1449438_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1448841 - 1449438

Intron Length:

598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAACGAAG

5'SS Class:

major

3'SS Sequence:

GTTTGTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

ATTGAATGAACG

Flanking Amino Acid:

QREEELQQILLEMEAKSETK

Intron Amino Acid Position:

534

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.6

0.44

1.2

62.2

43.7

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

87.2

0.84

0.8

84.6

Minor 5ss

37.3

-1.4

3.2

44.9

44.4

Minor BPS

46.3

-0.4

57.34

43.4

Associated Gene:

Gene:

LRSAM1

Ensembl Gene ID:

ENSAPLG00000005497

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045132

1446718 - 1469843

23126

ENSAPLT00000005710

1447029 - 1470969

23941

ENSAPLT00000046007

1446718 - 1469843

23126