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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1449535_1451782_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1449535 - 1451782

Intron Length:

2248

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTAGG

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTGGAT

U12 Branch Point Sequence:

GATGCCAGAGTC

Flanking Amino Acid:

RQELDTETLQGVIMEQRQAL

Intron Amino Acid Position:

502

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.9

74.4

41.9

Major BPS

56.3

0.16

1.5

57.1

49.4

Major PPT

81.4

0.71

0.8

75.8

32.6

Minor 5ss

41.2

-1

2.5

51.1

45.4

Minor BPS

-0.6

1.9

50.56

39.7

Associated Gene:

Gene:

LRSAM1

Ensembl Gene ID:

ENSAPLG00000005497

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045132

1446718 - 1469843

23126

ENSAPLT00000005710

1447029 - 1470969

23941

ENSAPLT00000046007

1446718 - 1469843

23126