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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1457840_1458678_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1457840 - 1458678

Intron Length:

839

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TTTGTTTTACCT

Flanking Amino Acid:

RIQKLIEDNQRQKQSSDILK

Intron Amino Acid Position:

348

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

64.3

47.1

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

30.2

-2.3

3.2

38.6

46.5

Minor BPS

63.6

0.5

1.7

82.56

39.6

Associated Gene:

Gene:

LRSAM1

Ensembl Gene ID:

ENSAPLG00000005497

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046007

1446718 - 1469843

23126

ENSAPLT00000045132

1446718 - 1469843

23126

ENSAPLT00000005710

1447029 - 1470969

23941