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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1459452_1460012_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1459452 - 1460012

Intron Length:

561

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGATG

5'SS Class:

strong_major

3'SS Sequence:

TTACTCTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

TTCTTCTTACTC

Flanking Amino Acid:

NKFLDYEKRKEKKMQEKLEF

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.2

0.97

0.8

82.5

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

78.1

0.63

0.8

77.4

Minor 5ss

35.9

-1.6

3.3

47.8

47.9

Minor BPS

65.4

0.46

1.6

73.1

38.8

Associated Gene:

Gene:

LRSAM1

Ensembl Gene ID:

ENSAPLG00000005497

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045132

1446718 - 1469843

23126

ENSAPLT00000005710

1447029 - 1470969

23941

ENSAPLT00000046007

1446718 - 1469843

23126